processing:list-peaks-from-cif
Table of Contents
timelessPeaksFromCIF
Objectives
This tools generates a list of peaks based on a cif file.
Arguments that are required are
- the cif file
- the wavelength
- the minimum and maximum 2theta values
The code will list the following information
- h, k, l
- intensity for single-crystal diffraction
- ds = 1/d (in anstroms)
- 2theta (in degrees)
Options
- You can set an output file name so the output is saved into a file rather than onscreen
- You can normalize intensities to a maximum of 100, they are raw by default
- You can filter peaks based with an intensity below threshold. Default is -1.0 (no filter).
Details
usage: timelessPeaksFromCIF [options] input.cif
Calculate a list of peaks and intensities for single-crystal diffraction based on a CIF file
Example:
timelessPeaksFromCIF -m 4 -M 15 -w 0.3738 -n True -c 5.0 mycif.cif
This is part of the TIMEleSS project
http://timeless.texture.rocks
positional arguments:
ciffile Path and name for CIF file
optional arguments:
-h, --help show this help message and exit
-m TTHETA_MIN, --ttheta_min TTHETA_MIN
Minimum 2 theta (degrees)
-M TTHETA_MAX, --ttheta_max TTHETA_MAX
Maximum 2 theta (degrees)
-w WAVELENGTH, --wavelength WAVELENGTH
Wavelength (anstroms)
-c MINI, --minI MINI Filter peaks below a cut-off intensity. Default is -1.0 (no filter)
-n NORMI, --normI NORMI
If set to True, intensities are normalized to a maximum of 100. Default is False (no filter)
-o OUTPUT, --output OUTPUT
If set, saves result to file name. Otherwise, prints results out to screen. Default is None (no filter)
processing/list-peaks-from-cif.txt · Last modified: by smerkel
