Go to the newly created folder (which is still empty). Then type to the Konsole:

  peaksearch.py -n ../XXX/YYY -f 0 -l 111 -d ../XXX/XXgrainm20000.edf -t &&&

where XXX is a space holder for the directory and YYY is a space holder for the stem of the edf image files (everything before the numbers).

&&& is a space holder for the intensity threshold. You can also add more than one threshold by exceeding the code by another -t &&& -t &&& -t &&& …, depending on how many thresholds you want to test.

From now on, we call the newly created files processed data. Proceed with ImageD11 to look at the processed data.